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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
UCEC rs7030754 chr9:32288784 T/C MYF5 chr12:81110691-81113452:+ -0.5 -7.05 5.73E-11 Box Plot
UCEC rs71601339 chr5:176544496 A/G LOC388955 chr2:63849182-63850159:- -0.75 -6.96 9.37E-11 Box Plot
UCEC rs7181063 chr15:74209527 C/A DCD chr12:55038375-55042277:- 0.54 6.97 9.17E-11 Box Plot
UCEC rs72671310 chr4:117512890 G/A USP3 chr15:63796710-63886839:+ 0.9 6.95 1.02E-10 Box Plot
UCEC rs72909285 chr1:57932295 A/T DCD chr12:55038375-55042277:- 0.56 7.36 1.08E-11 Box Plot
UCEC rs74339501 chr11:49220042 C/A FOLH1B chr11:89372395-89431886:+ 0.57 7.37 9.94E-12 Box Plot
UCEC rs7505421 chr18:14039000 C/T C22orf42 chr22:32544993-32555309:- 0.87 7.27 1.72E-11 Box Plot
UCEC rs75437513 chr4:182988517 G/A DCD chr12:55038375-55042277:- 0.69 6.91 1.22E-10 Box Plot
UCEC rs7585938 chr2:185993573 G/T DAAM1 chr14:59655364-59838123:+ -0.78 -6.96 9.76E-11 Box Plot
UCEC rs7604162 chr2:185989325 T/C DAAM1 chr14:59655364-59838123:+ -0.81 -7.12 4.08E-11 Box Plot
UCEC rs7741459 chr6:127878136 T/C STXBP3 chr1:109289296-109352148:+ 0.47 7.26 1.82E-11 Box Plot
UCEC rs7749538 chr6:127870729 A/G STXBP3 chr1:109289296-109352148:+ 0.46 7.09 4.71E-11 Box Plot
UCEC rs7749800 chr6:127870788 C/G STXBP3 chr1:109289296-109352148:+ 0.46 7.09 4.71E-11 Box Plot
UCEC rs7753954 chr6:127877081 A/G STXBP3 chr1:109289296-109352148:+ 0.46 7.11 4.21E-11 Box Plot
UCEC rs7759348 chr6:127878039 C/T STXBP3 chr1:109289296-109352148:+ 0.47 7.26 1.82E-11 Box Plot